Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose transport system permease protein rbsc | PAM7971_02971 | Not Available | Positive | 3022997 - 3023989 | 35386.3 |
| autoinducer 2 import system permease protein lsrd | PAM7971_02972 | Not Available | Positive | 3023986 - 3024984 | 34996.5 |
| d-tagatose 3-epimerase | PAM7971_02973 | Not Available | Positive | 3024984 - 3025832 | 31245.0 |
| pantothenate kinase | PAM7971_02974 | Not Available | Positive | 3025832 - 3026464 | 23224.6 |
| pts-dependent dihydroxyacetone kinase, adp-binding subunit dhal | PAM7971_02975 | Not Available | Negative | 3026492 - 3027130 | 21627.9 |
| pts-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhak | PAM7971_02976 | Not Available | Negative | 3027139 - 3028131 | 34969.1 |
| tonb-dependent heme receptor a precursor | PAM7971_02977 | Not Available | Positive | 3028481 - 3030526 | 73395.0 |
| hemin transport protein hems | PAM7971_02978 | Not Available | Positive | 3030608 - 3031669 | 39106.4 |
| hemin-binding periplasmic protein hmut precursor | PAM7971_02979 | Not Available | Positive | 3031666 - 3032514 | 29455.0 |
| hemin transport system permease protein hmuu | PAM7971_02980 | Not Available | Positive | 3032517 - 3033602 | 36816.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
