Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imelysin | PAM7971_02941 | Not Available | Positive | 2992615 - 2993871 | 43870.8 |
| cytochrome c | PAM7971_02942 | Not Available | Positive | 2993988 - 2995562 | 56898.5 |
| iron-regulated protein a precursor | PAM7971_02943 | Not Available | Positive | 2995565 - 2996596 | 36570.3 |
| hypothetical protein | PAM7971_02944 | Not Available | Positive | 2996598 - 2997689 | 38850.0 |
| hypothetical protein | PAM7971_02945 | Not Available | Positive | 2997699 - 2997917 | 8455.43 |
| hypothetical protein | PAM7971_02946 | Not Available | Positive | 2997951 - 2998106 | 5738.16 |
| atp-dependent clp protease proteolytic subunit | PAM7971_02947 | Not Available | Positive | 2998300 - 2998929 | 23299.2 |
| atp-dependent clp protease atp-binding subunit clpx | PAM7971_02948 | Not Available | Positive | 2999085 - 3000353 | 45711.9 |
| nadh dehydrogenase | PAM7971_02949 | Not Available | Positive | 3000540 - 3000923 | 14673.9 |
| putative phospholipid abc transporter-binding protein mlad | PAM7971_02950 | Not Available | Positive | 3000923 - 3001378 | 15481.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
