Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | PAM7971_02811 | Not Available | Negative | 2848079 - 2848348 | 9407.42 |
| 50s ribosomal protein l21 | PAM7971_02812 | Not Available | Negative | 2848371 - 2848973 | 20547.9 |
| hypothetical protein | PAM7971_02813 | Not Available | Negative | 2849275 - 2850111 | 30357.9 |
| bacterial regulatory proteins, luxr family | PAM7971_02814 | Not Available | Negative | 2850266 - 2851333 | 40227.8 |
| hypothetical protein | PAM7971_02815 | Not Available | Positive | 2851645 - 2855799 | 143478.0 |
| hypothetical protein | PAM7971_02816 | Not Available | Positive | 2855933 - 2856223 | 10342.3 |
| hypothetical protein | PAM7971_02817 | Not Available | Positive | 2856316 - 2856693 | 13784.7 |
| hypothetical protein | PAM7971_02818 | Not Available | Positive | 2856757 - 2857206 | 15756.0 |
| bacterial sh3 domain protein | PAM7971_02819 | Not Available | Positive | 2857311 - 2858429 | 39069.1 |
| phosphotransferase enzyme family protein | PAM7971_02820 | Not Available | Negative | 2858501 - 2859412 | 33680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
