Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose transport system permease protein araq | PAM7971_00243 | Not Available | Positive | 238401 - 239294 | 33140.6 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb precursor | PAM7971_00244 | Not Available | Positive | 239400 - 240653 | 45578.8 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | PAM7971_00245 | Not Available | Positive | 240711 - 241535 | 30089.6 |
| putative hth-type transcriptional regulator ydfh | PAM7971_00246 | Not Available | Negative | 242239 - 242931 | 26124.9 |
| hypothetical protein | PAM7971_00247 | Not Available | Positive | 243314 - 243469 | 5833.17 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_00248 | Not Available | Positive | 243528 - 244271 | 25471.6 |
| cupin domain protein | PAM7971_00249 | Not Available | Positive | 244292 - 244603 | 11538.5 |
| 2-dehydro-3-deoxygluconokinase | PAM7971_00250 | Not Available | Positive | 244622 - 245533 | 32073.1 |
| hypothetical protein | PAM7971_00251 | Not Available | Positive | 245564 - 245785 | 8387.07 |
| ahpc/tsa family protein | PAM7971_00252 | Not Available | Positive | 245725 - 246243 | 18744.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
