Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair-coupling factor | PAM7971_02771 | Not Available | Negative | 2811886 - 2815350 | 127901.0 |
| hypothetical protein | PAM7971_02772 | Not Available | Negative | 2815355 - 2815846 | 17958.6 |
| delta-aminolevulinic acid dehydratase | PAM7971_02773 | Not Available | Positive | 2816036 - 2817034 | 36534.2 |
| hypothetical protein | PAM7971_02774 | Not Available | Positive | 2817211 - 2817801 | 20718.8 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PAM7971_02775 | Not Available | Negative | 2817891 - 2819003 | 41194.9 |
| hypothetical protein | PAM7971_02776 | Not Available | Positive | 2819247 - 2819552 | 10947.8 |
| 5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase | PAM7971_02777 | Not Available | Positive | 2819637 - 2820629 | 35369.5 |
| ribosomal large subunit pseudouridine synthase e | PAM7971_02778 | Not Available | Positive | 2820654 - 2821220 | 21147.7 |
| na(+)-translocating nadh-quinone reductase subunit f | PAM7971_02779 | Not Available | Positive | 2821231 - 2823288 | 71918.9 |
| Trna-gly | Not Available | Not Available | Positive | 2823356 - 2823429 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
