Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | PAM7971_02701 | Not Available | Negative | 2739624 - 2740529 | 34286.9 |
| cysteine--trna ligase | PAM7971_02702 | Not Available | Positive | 2740645 - 2742213 | 58672.3 |
| 2-isopropylmalate synthase | PAM7971_02703 | Not Available | Positive | 2742210 - 2743850 | 58909.7 |
| squalene/phytoene synthase | PAM7971_02704 | Not Available | Positive | 2743851 - 2744642 | 28788.7 |
| hypothetical protein | PAM7971_02705 | Not Available | Negative | 2744615 - 2744848 | 8562.21 |
| hypothetical protein | PAM7971_02706 | Not Available | Positive | 2744866 - 2745036 | 6197.86 |
| fumarate hydratase class ii | PAM7971_02707 | Not Available | Negative | 2745134 - 2746528 | 49693.6 |
| stringent starvation protein b | PAM7971_02708 | Not Available | Negative | 2746783 - 2747295 | 19520.5 |
| Tmrna,resume consensus sequence (at 220): agtagttgcaaatgacaa | Not Available | Not Available | Positive | 2747692 - 2748047 | Not Available |
| acrylyl-coa reductase acui | PAM7971_02710 | Not Available | Positive | 2748274 - 2749257 | 34047.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
