Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| core-2/i-branching enzyme | PAM7971_02661 | Not Available | Positive | 2706625 - 2708322 | 65572.1 |
| hypothetical protein | PAM7971_02662 | Not Available | Positive | 2708326 - 2709735 | 53244.3 |
| nitrogen regulatory protein | PAM7971_02663 | Not Available | Negative | 2709744 - 2710319 | 20033.1 |
| putative sigma-54 modulation protein | PAM7971_02664 | Not Available | Negative | 2710258 - 2710833 | 21085.0 |
| lipopolysaccharide export system atp-binding protein lptb | PAM7971_02665 | Not Available | Negative | 2711085 - 2711822 | 27303.1 |
| lipopolysaccharide export system protein lpta precursor | PAM7971_02666 | Not Available | Negative | 2711822 - 2712328 | 17199.7 |
| lipopolysaccharide-assembly, lptc-related | PAM7971_02667 | Not Available | Negative | 2712347 - 2712946 | 21519.5 |
| arabinose 5-phosphate isomerase kdsd | PAM7971_02668 | Not Available | Negative | 2712957 - 2713919 | 33788.1 |
| ribonuclease d | PAM7971_02669 | Not Available | Negative | 2713983 - 2714594 | 23002.9 |
| nadph-dependent ferric-chelate reductase | PAM7971_02670 | Not Available | Negative | 2714906 - 2716207 | 47305.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
