Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_02621 | Not Available | Positive | 2665963 - 2666712 | 27268.4 |
| l-threonine dehydratase biosynthetic ilva | PAM7971_02622 | Not Available | Positive | 2666709 - 2667965 | 45987.7 |
| hpt domain protein | PAM7971_02623 | Not Available | Negative | 2667928 - 2668293 | 13734.3 |
| transcriptional regulatory protein afsq1 | PAM7971_02624 | Not Available | Positive | 2668443 - 2669726 | 46672.5 |
| rna pyrophosphohydrolase | PAM7971_02625 | Not Available | Negative | 2669644 - 2670144 | 18708.6 |
| 33 kda chaperonin | PAM7971_02626 | Not Available | Positive | 2670223 - 2671224 | 36412.0 |
| putative nudix hydrolase | PAM7971_02627 | Not Available | Positive | 2671208 - 2671807 | 22122.2 |
| cca-adding enzyme | PAM7971_02628 | Not Available | Positive | 2671807 - 2672970 | 42486.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | PAM7971_02629 | Not Available | Positive | 2672967 - 2674184 | 43769.1 |
| l,d-transpeptidase catalytic domain | PAM7971_02630 | Not Available | Positive | 2674253 - 2674753 | 18299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
