Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-iii oxidase 1 | PAM7971_02611 | Not Available | Negative | 2653973 - 2655124 | 42734.4 |
| putative aminoacrylate peracid reductase rutc | PAM7971_02612 | Not Available | Negative | 2655127 - 2655510 | 13832.7 |
| non-canonical purine ntp pyrophosphatase | PAM7971_02613 | Not Available | Negative | 2655507 - 2656127 | 22407.6 |
| ribonuclease ph | PAM7971_02614 | Not Available | Negative | 2656127 - 2656840 | 25338.4 |
| heat-inducible transcription repressor hrca | PAM7971_02615 | Not Available | Positive | 2656962 - 2658026 | 38979.6 |
| heat shock protein grpe | PAM7971_02616 | Not Available | Positive | 2658037 - 2658588 | 20715.4 |
| dna mismatch repair protein muts | PAM7971_02617 | Not Available | Negative | 2658595 - 2661252 | 96651.9 |
| nadp-dependent malic enzyme | PAM7971_02618 | Not Available | Positive | 2661390 - 2663654 | 81215.6 |
| ribokinase | PAM7971_02619 | Not Available | Positive | 2663671 - 2664546 | 30525.1 |
| argininosuccinate synthase | PAM7971_02620 | Not Available | Negative | 2664602 - 2665825 | 45145.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
