Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | PAM7971_02601 | Not Available | Negative | 2644739 - 2645569 | 29691.0 |
| maf-like protein ycef | PAM7971_02602 | Not Available | Negative | 2645566 - 2646165 | 22202.6 |
| hypothetical protein | PAM7971_02603 | Not Available | Negative | 2646162 - 2646272 | 3987.8 |
| hypothetical protein | PAM7971_02604 | Not Available | Positive | 2646572 - 2647024 | 17317.6 |
| hypothetical protein | PAM7971_02605 | Not Available | Positive | 2647162 - 2648433 | 47277.1 |
| trna modification gtpase mnme | PAM7971_02606 | Not Available | Positive | 2648459 - 2649748 | 45603.7 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | PAM7971_02607 | Not Available | Positive | 2649773 - 2651644 | 67843.8 |
| ribosomal rna small subunit methyltransferase g | PAM7971_02608 | Not Available | Positive | 2651645 - 2652262 | 22927.4 |
| chromosome partitioning protein para | PAM7971_02609 | Not Available | Positive | 2652255 - 2653052 | 28936.6 |
| chromosome-partitioning protein parb | PAM7971_02610 | Not Available | Positive | 2653056 - 2653970 | 33472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
