Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein kinase walk | PAM7971_02501 | Not Available | Negative | 2543793 - 2546498 | 97612.4 |
| hypothetical protein | PAM7971_02502 | Not Available | Negative | 2546499 - 2546837 | 12285.8 |
| putative transcriptional regulatory protein tcrx | PAM7971_02503 | Not Available | Negative | 2546830 - 2547234 | 14156.1 |
| helix-turn-helix protein | PAM7971_02504 | Not Available | Negative | 2547313 - 2548719 | 49985.5 |
| receptor family ligand binding region | PAM7971_02505 | Not Available | Positive | 2549002 - 2550345 | 46878.1 |
| high-affinity branched-chain amino acid transport system permease protein livh | PAM7971_02506 | Not Available | Positive | 2550525 - 2551556 | 37098.5 |
| leucine/isoleucine/valine transporter permease subunit | PAM7971_02507 | Not Available | Positive | 2551560 - 2552783 | 44390.3 |
| methionine import atp-binding protein metn | PAM7971_02508 | Not Available | Positive | 2552797 - 2553558 | 27900.9 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PAM7971_02509 | Not Available | Positive | 2553568 - 2554332 | 28217.9 |
| hypothetical protein | PAM7971_02510 | Not Available | Negative | 2554654 - 2554926 | 9372.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
