Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | PAM7971_02461 | Not Available | Positive | 2501426 - 2501884 | 16779.8 |
| arginyl-trna-protein transferase | PAM7971_02462 | Not Available | Positive | 2502112 - 2502897 | 29221.5 |
| hypothetical protein | PAM7971_02463 | Not Available | Negative | 2502916 - 2503377 | 16513.0 |
| sialic acid trap transporter permease protein siat | PAM7971_02464 | Not Available | Negative | 2503539 - 2505893 | 83075.2 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_02465 | Not Available | Negative | 2505955 - 2506884 | 35004.8 |
| monocarboxylate 2-oxoacid-binding periplasmic protein precursor | PAM7971_02466 | Not Available | Negative | 2507021 - 2508115 | 38796.7 |
| oxygen sensor histidine kinase nreb | PAM7971_02467 | Not Available | Positive | 2508421 - 2509836 | 52188.9 |
| oxygen regulatory protein nrec | PAM7971_02468 | Not Available | Positive | 2509864 - 2510511 | 23292.2 |
| hypothetical protein | PAM7971_02469 | Not Available | Negative | 2510649 - 2512538 | 68309.1 |
| hypothetical protein | PAM7971_02470 | Not Available | Positive | 2512779 - 2513342 | 20507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
