Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | PAM7971_02381 | Not Available | Negative | 2406069 - 2407154 | 38748.2 |
| oligo-1,6-glucosidase | PAM7971_02382 | Not Available | Negative | 2407171 - 2408817 | 61683.9 |
| l-arabinose transport system permease protein araq | PAM7971_02383 | Not Available | Negative | 2408834 - 2410096 | 45672.6 |
| lactose transport system permease protein lacf | PAM7971_02384 | Not Available | Negative | 2410109 - 2411110 | 37430.6 |
| bacterial extracellular solute-binding protein | PAM7971_02385 | Not Available | Negative | 2411421 - 2412704 | 45581.0 |
| hth-type transcriptional regulator rafr | PAM7971_02386 | Not Available | Positive | 2413003 - 2414040 | 38050.2 |
| beta-glucosidase a | PAM7971_02387 | Not Available | Positive | 2414295 - 2415629 | 50538.2 |
| glucokinase | PAM7971_02388 | Not Available | Positive | 2415633 - 2416616 | 34795.3 |
| hypothetical protein | PAM7971_02389 | Not Available | Positive | 2416803 - 2417084 | 10298.3 |
| hypothetical protein | PAM7971_02390 | Not Available | Positive | 2417081 - 2417446 | 13160.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
