Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator acrr | PAM7971_02361 | Not Available | Positive | 2383755 - 2384372 | 22531.9 |
| threonine efflux protein | PAM7971_02362 | Not Available | Positive | 2384453 - 2385091 | 22711.2 |
| 30s ribosomal protein s9 | PAM7971_02363 | Not Available | Negative | 2385217 - 2385699 | 17547.3 |
| 50s ribosomal protein l13 | PAM7971_02364 | Not Available | Negative | 2385702 - 2386166 | 17229.1 |
| isocitrate dehydrogenase | PAM7971_02365 | Not Available | Positive | 2386537 - 2387751 | 45719.8 |
| hupe / urej protein | PAM7971_02366 | Not Available | Positive | 2387930 - 2388436 | 17566.2 |
| hypothetical protein | PAM7971_02367 | Not Available | Positive | 2388613 - 2389167 | 20346.2 |
| hypothetical protein | PAM7971_02368 | Not Available | Positive | 2389304 - 2389927 | 22514.1 |
| hypothetical protein | PAM7971_02369 | Not Available | Positive | 2389956 - 2390570 | 22164.8 |
| tpr repeat-containing protein yfgc precursor | PAM7971_02370 | Not Available | Negative | 2390602 - 2391648 | 37504.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
