Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein asnc | PAM7971_02301 | Not Available | Positive | 2320863 - 2321294 | 15493.8 |
| d-alanyl-d-alanine carboxypeptidase precursor | PAM7971_02302 | Not Available | Negative | 2321309 - 2322457 | 42802.4 |
| valine--trna ligase | PAM7971_02303 | Not Available | Positive | 2322793 - 2325819 | 113301.0 |
| histidinol-phosphate aminotransferase 2 | PAM7971_02304 | Not Available | Positive | 2325951 - 2327054 | 38762.4 |
| soluble hydrogenase 42 kda subunit | PAM7971_02305 | Not Available | Negative | 2327058 - 2328302 | 44432.1 |
| hypothetical protein | PAM7971_02306 | Not Available | Positive | 2328477 - 2329199 | 27659.9 |
| lipid a export atp-binding/permease protein msba | PAM7971_02307 | Not Available | Positive | 2329284 - 2331191 | 68999.4 |
| pgl/p-hbad biosynthesis glycosyltransferase/mt3031 | PAM7971_02308 | Not Available | Negative | 2331052 - 2331729 | 24474.6 |
| putative global regulator | PAM7971_02309 | Not Available | Positive | 2331809 - 2332555 | 26957.1 |
| dna-3-methyladenine glycosylase 1 | PAM7971_02310 | Not Available | Negative | 2332533 - 2333159 | 23579.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
