Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx | PAM7971_02261 | Not Available | Positive | 2281675 - 2282199 | 18948.3 |
| regulatory protein spx | PAM7971_02262 | Not Available | Negative | 2282196 - 2282510 | 11695.2 |
| cold shock protein cspa | PAM7971_02263 | Not Available | Positive | 2282781 - 2282987 | 7241.5 |
| gdsl-like lipase/acylhydrolase | PAM7971_02264 | Not Available | Positive | 2283065 - 2283703 | 23076.5 |
| hypothetical protein | PAM7971_02265 | Not Available | Negative | 2283727 - 2284125 | 14583.0 |
| dihydrofolate reductase | PAM7971_02266 | Not Available | Negative | 2284192 - 2284677 | 18254.9 |
| thymidylate synthase | PAM7971_02267 | Not Available | Negative | 2284689 - 2285522 | 31572.9 |
| lactoylglutathione lyase | PAM7971_02268 | Not Available | Positive | 2285657 - 2286079 | 15960.9 |
| hypothetical protein | PAM7971_02269 | Not Available | Negative | 2286220 - 2286717 | 19083.8 |
| flavinator of succinate dehydrogenase | PAM7971_02270 | Not Available | Negative | 2286909 - 2287202 | 10977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
