Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | PAM7971_02201 | Not Available | Negative | 2216544 - 2217464 | 33302.0 |
| spore cortex-lytic enzyme precursor | PAM7971_02202 | Not Available | Negative | 2217611 - 2218312 | 25574.8 |
| pyruvate, phosphate dikinase | PAM7971_02203 | Not Available | Negative | 2218491 - 2221055 | 92827.4 |
| glycine--trna ligase beta subunit | PAM7971_02204 | Not Available | Negative | 2221143 - 2223416 | 83090.8 |
| hypothetical protein | PAM7971_02205 | Not Available | Negative | 2223436 - 2223969 | 18546.7 |
| glycine--trna ligase alpha subunit | PAM7971_02206 | Not Available | Negative | 2223966 - 2224907 | 34988.2 |
| putative peptidoglycan binding domain protein | PAM7971_02207 | Not Available | Positive | 2225224 - 2226975 | 61243.9 |
| trk system potassium uptake protein trkh | PAM7971_02208 | Not Available | Negative | 2227058 - 2228506 | 51663.5 |
| hypothetical protein | PAM7971_02209 | Not Available | Negative | 2228612 - 2230021 | 50980.3 |
| hypothetical protein | PAM7971_02210 | Not Available | Negative | 2230110 - 2230487 | 13441.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
