Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rna polymerase sigma factor feci | PAM7971_02181 | Not Available | Positive | 2193342 - 2193863 | 19735.0 |
| fec operon regulator fecr | PAM7971_02182 | Not Available | Positive | 2193933 - 2194895 | 34570.2 |
| putative tonb-dependent receptor precursor | PAM7971_02183 | Not Available | Positive | 2195050 - 2197695 | 95268.5 |
| extracellular serine protease precursor | PAM7971_02184 | Not Available | Positive | 2197773 - 2201012 | 108602.0 |
| invasion associated locus b (ialb) protein | PAM7971_02185 | Not Available | Positive | 2201129 - 2201683 | 19844.9 |
| glycosyltransferase (glcnac) | PAM7971_02186 | Not Available | Positive | 2201683 - 2202681 | 37669.8 |
| heme oxygenase | PAM7971_02187 | Not Available | Positive | 2202730 - 2203377 | 23607.8 |
| putative acyltransferase | PAM7971_02188 | Not Available | Positive | 2203476 - 2203955 | 18097.7 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase puud | PAM7971_02189 | Not Available | Negative | 2203952 - 2204722 | 27632.0 |
| hypothetical protein | PAM7971_02190 | Not Available | Negative | 2204908 - 2205336 | 14204.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
