Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha 1 | PAM7971_02111 | Not Available | Negative | 2123540 - 2125252 | 60714.0 |
| hypothetical protein | PAM7971_02112 | Not Available | Negative | 2125267 - 2125650 | 14271.8 |
| urease subunit beta 1 | PAM7971_02113 | Not Available | Negative | 2125650 - 2125955 | 10954.9 |
| urease subunit gamma | PAM7971_02114 | Not Available | Negative | 2125965 - 2126267 | 11034.6 |
| urease accessory protein ured | PAM7971_02115 | Not Available | Negative | 2126277 - 2127101 | 29632.8 |
| dihydroorotase | PAM7971_02116 | Not Available | Positive | 2127273 - 2128313 | 37740.2 |
| orotate phosphoribosyltransferase | PAM7971_02117 | Not Available | Positive | 2128342 - 2129022 | 25003.0 |
| replicative dna helicase | PAM7971_02118 | Not Available | Positive | 2129265 - 2130863 | 58039.6 |
| alanine racemase | PAM7971_02119 | Not Available | Positive | 2130942 - 2131982 | 37032.3 |
| putative phospholipid abc transporter permease protein mlae | PAM7971_02120 | Not Available | Positive | 2131979 - 2132770 | 27433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
