Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoprotease family protein | PAM7971_02071 | Not Available | Positive | 2093658 - 2094269 | 21727.3 |
| threonylcarbamoyl-amp synthase | PAM7971_02072 | Not Available | Positive | 2094266 - 2094880 | 21202.7 |
| trna n6-adenosine threonylcarbamoyltransferase | PAM7971_02073 | Not Available | Positive | 2094873 - 2095865 | 35301.8 |
| isocitrate dehydrogenase | PAM7971_02074 | Not Available | Positive | 2096075 - 2098273 | 78471.1 |
| atp-dependent rna helicase dead | PAM7971_02075 | Not Available | Negative | 2098493 - 2100550 | 74382.8 |
| response regulator rcp1 | PAM7971_02076 | Not Available | Negative | 2100909 - 2101355 | 16789.4 |
| phytochrome-like protein cph1 | PAM7971_02077 | Not Available | Negative | 2101352 - 2103181 | 68187.2 |
| chemotaxis protein chey | PAM7971_02078 | Not Available | Negative | 2103181 - 2103882 | 25864.7 |
| putative sensor histidine kinase tcry | PAM7971_02079 | Not Available | Positive | 2104059 - 2104751 | 25432.3 |
| transposase | PAM7971_02080 | Not Available | Positive | 2104968 - 2105246 | 10639.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
