Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_02061 | Not Available | Positive | 2085878 - 2086258 | 13516.2 |
| hypothetical protein | PAM7971_02062 | Not Available | Positive | 2086248 - 2087360 | 41733.2 |
| 2-dehydro-3-deoxygluconokinase | PAM7971_02063 | Not Available | Positive | 2087447 - 2088367 | 32401.8 |
| d-tyrosyl-trna(tyr) deacylase | PAM7971_02064 | Not Available | Positive | 2088370 - 2088810 | 15479.6 |
| anti-sigma-e factor chrr | PAM7971_02065 | Not Available | Negative | 2088891 - 2089529 | 22630.1 |
| ecf rna polymerase sigma factor rpoe | PAM7971_02066 | Not Available | Negative | 2089532 - 2090248 | 27097.9 |
| protoporphyrinogen oxidase | PAM7971_02067 | Not Available | Positive | 2090304 - 2091584 | 47229.3 |
| hypothetical protein | PAM7971_02068 | Not Available | Positive | 2091581 - 2092360 | 28934.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_02069 | Not Available | Positive | 2092357 - 2093085 | 26339.8 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | PAM7971_02070 | Not Available | Positive | 2093177 - 2093665 | 17676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
