Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein pmpr | PAM7971_02030 | Not Available | Negative | 2056793 - 2057542 | 27232.8 |
| citrate transporter | PAM7971_02031 | Not Available | Negative | 2057654 - 2059435 | 63861.0 |
| hypothetical protein | PAM7971_02032 | Not Available | Negative | 2059568 - 2060380 | 29513.6 |
| putative 5-formyltetrahydrofolate cyclo-ligase | PAM7971_02033 | Not Available | Negative | 2060451 - 2061020 | 20519.0 |
| magnesium transporter mgte | PAM7971_02034 | Not Available | Negative | 2061068 - 2062459 | 50394.9 |
| guanine deaminase | PAM7971_02035 | Not Available | Positive | 2062593 - 2063909 | 47384.4 |
| 8-oxoguanine deaminase | PAM7971_02036 | Not Available | Negative | 2063993 - 2065336 | 48234.8 |
| histidinol-phosphatase | PAM7971_02037 | Not Available | Negative | 2065438 - 2066247 | 28415.7 |
| anaerobic benzoate catabolism transcriptional regulator | PAM7971_02038 | Not Available | Negative | 2066518 - 2066892 | 14087.9 |
| phthiocerol synthesis polyketide synthase type i ppsc | PAM7971_02039 | Not Available | Positive | 2067270 - 2068244 | 34084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
