Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_02000 | Not Available | Negative | 2029925 - 2030425 | 18287.3 |
| proline--trna ligase | PAM7971_02001 | Not Available | Negative | 2030591 - 2031928 | 50485.2 |
| ai-2 transport protein tqsa | PAM7971_02002 | Not Available | Positive | 2032169 - 2033353 | 42661.8 |
| dnaa regulatory inactivator hda | PAM7971_02003 | Not Available | Positive | 2033357 - 2034061 | 25473.7 |
| polyphosphate kinase | PAM7971_02004 | Not Available | Positive | 2034089 - 2036266 | 80815.0 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PAM7971_02005 | Not Available | Positive | 2036380 - 2037942 | 57833.5 |
| endonuclease/exonuclease/phosphatase family protein | PAM7971_02006 | Not Available | Negative | 2037969 - 2039006 | 39068.4 |
| dnaj-like protein djla | PAM7971_02007 | Not Available | Negative | 2039006 - 2039689 | 25400.3 |
| n-acyltransferase ynca | PAM7971_02008 | Not Available | Negative | 2039771 - 2040262 | 18092.4 |
| hypothetical protein | PAM7971_02009 | Not Available | Negative | 2040259 - 2040879 | 23126.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
