Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator pled | PAM7971_01990 | Not Available | Positive | 2020140 - 2021516 | 49829.3 |
| hypothetical protein | PAM7971_01991 | Not Available | Negative | 2021555 - 2022112 | 20304.5 |
| hypothetical protein | PAM7971_01992 | Not Available | Negative | 2022117 - 2022566 | 15321.7 |
| ecf rna polymerase sigma factor sigw | PAM7971_01993 | Not Available | Negative | 2022553 - 2023143 | 21885.2 |
| ef hand | PAM7971_01994 | Not Available | Negative | 2023301 - 2023843 | 18944.0 |
| hypothetical protein | PAM7971_01995 | Not Available | Positive | 2024104 - 2024556 | 16578.6 |
| dna topoisomerase 4 subunit b | PAM7971_01996 | Not Available | Positive | 2024761 - 2026716 | 71845.8 |
| hypothetical protein | PAM7971_01997 | Not Available | Positive | 2026763 - 2027566 | 30172.8 |
| lipoprotein-releasing system atp-binding protein lold | PAM7971_01998 | Not Available | Negative | 2027788 - 2028471 | 24182.2 |
| lipoprotein-releasing system transmembrane protein lolc | PAM7971_01999 | Not Available | Negative | 2028464 - 2029657 | 43004.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
