Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | PAM7971_01980 | Not Available | Positive | 2011600 - 2012910 | 45530.0 |
| ceramidase | PAM7971_01981 | Not Available | Positive | 2012915 - 2013601 | 25015.5 |
| fructose-1,6-bisphosphatase class 2 | PAM7971_01982 | Not Available | Positive | 2013799 - 2014761 | 33682.6 |
| single-stranded-dna-specific exonuclease recj | PAM7971_01983 | Not Available | Positive | 2014872 - 2016632 | 62380.3 |
| Trna-glu | Not Available | Not Available | Positive | 2016736 - 2016810 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2017022 - 2017096 | Not Available |
| diguanylate cyclase dosc | PAM7971_01986 | Not Available | Negative | 2017287 - 2018297 | 37357.4 |
| heme no binding protein | PAM7971_01987 | Not Available | Negative | 2018313 - 2018903 | 22082.2 |
| phosphoglycolate phosphatase | PAM7971_01988 | Not Available | Negative | 2019044 - 2019748 | 24527.5 |
| hypothetical protein | PAM7971_01989 | Not Available | Negative | 2019739 - 2020017 | 10144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
