Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | PAM7971_01960 | Not Available | Negative | 1992171 - 1992782 | 21802.9 |
| capsule polysaccharide biosynthesis protein | PAM7971_01961 | Not Available | Positive | 1993006 - 1994298 | 49248.9 |
| polysaccharide biosynthesis/export protein | PAM7971_01962 | Not Available | Positive | 1994477 - 1995607 | 39826.2 |
| capsule polysaccharide biosynthesis protein | PAM7971_01963 | Not Available | Positive | 1995615 - 1997600 | 71888.4 |
| riboflavin biosynthesis protein ribd | PAM7971_01964 | Not Available | Negative | 1997602 - 1998690 | 37908.0 |
| transcriptional repressor nrdr | PAM7971_01965 | Not Available | Negative | 1998696 - 1999163 | 17937.4 |
| hypothetical protein | PAM7971_01966 | Not Available | Negative | 1999309 - 1999728 | 15547.7 |
| hypothetical protein | PAM7971_01967 | Not Available | Negative | 1999783 - 2000292 | 18519.0 |
| putative hth-type transcriptional regulator yybr | PAM7971_01968 | Not Available | Negative | 2000332 - 2000733 | 14994.2 |
| quinone oxidoreductase 2 | PAM7971_01969 | Not Available | Positive | 2000840 - 2001706 | 30138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
