Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scp-2 sterol transfer family protein | PAM7971_01940 | Not Available | Positive | 1977336 - 1977626 | 9830.52 |
| phospholipase ytpa | PAM7971_01941 | Not Available | Positive | 1977711 - 1978664 | 34719.4 |
| oligoendopeptidase f, plasmid | PAM7971_01942 | Not Available | Positive | 1978780 - 1980642 | 69621.0 |
| hypothetical protein | PAM7971_01943 | Not Available | Negative | 1980704 - 1981021 | 11968.9 |
| 1,5-anhydro-d-fructose reductase | PAM7971_01944 | Not Available | Negative | 1981045 - 1982028 | 36211.7 |
| hypothetical protein | PAM7971_01945 | Not Available | Negative | 1981988 - 1982161 | 6485.93 |
| rna polymerase sigma factor rpoh | PAM7971_01946 | Not Available | Negative | 1982205 - 1983101 | 33906.3 |
| hypothetical protein | PAM7971_01947 | Not Available | Positive | 1983167 - 1983337 | 6068.48 |
| ribosomal large subunit pseudouridine synthase d | PAM7971_01948 | Not Available | Negative | 1983334 - 1984371 | 37278.1 |
| hypothetical protein | PAM7971_01949 | Not Available | Positive | 1984448 - 1984708 | 9343.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
