Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | PAM7971_01920 | Not Available | Negative | 1951658 - 1953172 | 53374.6 |
| putative abc transporter substrate-binding protein yeso | PAM7971_01921 | Not Available | Negative | 1953232 - 1954491 | 45135.6 |
| maltose/maltodextrin import atp-binding protein malk | PAM7971_01922 | Not Available | Negative | 1954524 - 1955642 | 40570.3 |
| lactose transport system permease protein lacg | PAM7971_01923 | Not Available | Negative | 1955642 - 1956547 | 33769.9 |
| lactose transport system permease protein lacf | PAM7971_01924 | Not Available | Negative | 1956552 - 1957436 | 33402.9 |
| alpha-galacturonidase | PAM7971_01925 | Not Available | Negative | 1957436 - 1958833 | 50599.0 |
| dna-binding transcriptional regulator arac | PAM7971_01926 | Not Available | Positive | 1959025 - 1959858 | 31233.5 |
| d-galactarate dehydratase | PAM7971_01927 | Not Available | Negative | 1959888 - 1960241 | 12726.0 |
| 30s ribosomal protein s21 | PAM7971_01928 | Not Available | Positive | 1960418 - 1960618 | 7931.75 |
| hypothetical protein | PAM7971_01929 | Not Available | Negative | 1961215 - 1961472 | 8828.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
