Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_01909 | Not Available | Negative | 1941209 - 1941910 | 25909.6 |
| yhs domain protein | PAM7971_01910 | Not Available | Negative | 1941926 - 1942396 | 16724.8 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | PAM7971_01911 | Not Available | Negative | 1942477 - 1943256 | 27909.6 |
| hypothetical protein | PAM7971_01913 | Not Available | Negative | 1944594 - 1944800 | 8144.76 |
| putative metal chaperone ycic | PAM7971_01914 | Not Available | Negative | 1944890 - 1946110 | 45251.5 |
| metal-binding protein zint precursor | PAM7971_01915 | Not Available | Negative | 1946219 - 1946860 | 23718.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PAM7971_01916 | Not Available | Positive | 1947787 - 1948599 | 28956.0 |
| arabinose operon regulatory protein | PAM7971_01917 | Not Available | Negative | 1948948 - 1949910 | 35473.8 |
| hypothetical protein | PAM7971_01918 | Not Available | Positive | 1950058 - 1950459 | 13779.3 |
| 24.9 kda protein in pica locus | PAM7971_01919 | Not Available | Negative | 1950567 - 1951658 | 40912.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
