Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine synthase | PAM7971_01809 | Not Available | Negative | 1850168 - 1851415 | 44978.7 |
| carboxynorspermidine/carboxyspermidine decarboxylase | PAM7971_01810 | Not Available | Negative | 1851464 - 1852573 | 41343.1 |
| tryptophan synthase alpha chain | PAM7971_01811 | Not Available | Negative | 1852721 - 1853524 | 28002.6 |
| ribosome-binding atpase ychf | PAM7971_01812 | Not Available | Positive | 1853665 - 1854762 | 39307.8 |
| coniferyl aldehyde dehydrogenase | PAM7971_01813 | Not Available | Negative | 1854958 - 1856376 | 51405.2 |
| undecaprenyl phosphate n,n'-diacetylbacillosamine 1-phosphate transferase | PAM7971_01814 | Not Available | Positive | 1856831 - 1857520 | 26135.8 |
| Trna-ser | Not Available | Not Available | Positive | 1857913 - 1858000 | Not Available |
| site-specific tyrosine recombinase xerc | PAM7971_01816 | Not Available | Positive | 1858132 - 1859391 | 47135.7 |
| hypothetical protein | PAM7971_01817 | Not Available | Negative | 1859318 - 1859497 | 6779.18 |
| hypothetical protein | PAM7971_01818 | Not Available | Negative | 1859497 - 1859691 | 6844.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
