Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | PAM7971_01759 | Not Available | Positive | 1801137 - 1801586 | 16672.9 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_01760 | Not Available | Positive | 1801590 - 1803119 | 53784.6 |
| putative l-lactate dehydrogenase operon regulatory protein | PAM7971_01761 | Not Available | Positive | 1803291 - 1803989 | 26078.1 |
| hypothetical protein | PAM7971_01762 | Not Available | Negative | 1804399 - 1804737 | 12336.6 |
| l-fuculokinase | PAM7971_01763 | Not Available | Negative | 1804857 - 1806233 | 49161.1 |
| l-rhamnose mutarotase | PAM7971_01764 | Not Available | Negative | 1806230 - 1806547 | 12068.4 |
| autoinducer 2 import system permease protein lsrd | PAM7971_01765 | Not Available | Negative | 1806544 - 1807548 | 35663.7 |
| d-allose transport system permease protein alsc | PAM7971_01766 | Not Available | Negative | 1807545 - 1808528 | 33726.5 |
| ribose import atp-binding protein rbsa | PAM7971_01767 | Not Available | Negative | 1808532 - 1810067 | 55224.7 |
| autoinducer 2-binding protein lsrb precursor | PAM7971_01768 | Not Available | Negative | 1810148 - 1811143 | 34297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
