Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein ycjp | PAM7971_01749 | Not Available | Negative | 1788475 - 1789299 | 30519.1 |
| lactose transport system permease protein lacf | PAM7971_01750 | Not Available | Negative | 1789296 - 1790597 | 48564.8 |
| bacterial extracellular solute-binding protein | PAM7971_01751 | Not Available | Negative | 1790704 - 1792047 | 49227.4 |
| catalase-peroxidase 1 | PAM7971_01752 | Not Available | Negative | 1792302 - 1794479 | 79701.5 |
| hydrogen peroxide-inducible genes activator | PAM7971_01753 | Not Available | Positive | 1794617 - 1795504 | 32460.8 |
| Trna-arg | Not Available | Not Available | Positive | 1795664 - 1795740 | Not Available |
| yaeq protein | PAM7971_01755 | Not Available | Positive | 1795872 - 1796417 | 20413.4 |
| hypothetical protein | PAM7971_01756 | Not Available | Positive | 1796805 - 1797722 | 33039.4 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PAM7971_01757 | Not Available | Positive | 1798551 - 1799276 | 26051.2 |
| tripartite tricarboxylate transporter family receptor | PAM7971_01758 | Not Available | Positive | 1799992 - 1800957 | 33774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
