Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_01729 | Not Available | Negative | 1766219 - 1766872 | 25655.1 |
| putative abc transporter atp-binding protein yjjk | PAM7971_01730 | Not Available | Negative | 1767025 - 1768683 | 61574.1 |
| hypothetical protein | PAM7971_01731 | Not Available | Negative | 1768768 - 1769997 | 46592.5 |
| putative nicotinate-nucleotide adenylyltransferase | PAM7971_01732 | Not Available | Positive | 1770009 - 1770614 | 22347.0 |
| d-alanyl-d-alanine carboxypeptidase precursor | PAM7971_01733 | Not Available | Positive | 1770682 - 1772226 | 54063.0 |
| hypothetical protein | PAM7971_01734 | Not Available | Negative | 1772240 - 1772662 | 15710.6 |
| lysine--trna ligase | PAM7971_01735 | Not Available | Positive | 1772842 - 1774485 | 61237.6 |
| pectate lyase superfamily protein | PAM7971_01736 | Not Available | Positive | 1774783 - 1777074 | 82208.4 |
| pyridoxamine 5'-phosphate oxidase | PAM7971_01737 | Not Available | Negative | 1777137 - 1777772 | 23433.0 |
| rhodanese-like domain protein | PAM7971_01738 | Not Available | Positive | 1777821 - 1778432 | 21845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
