Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | PAM7971_01718 | Not Available | Positive | 1753552 - 1754742 | 42589.0 |
| glycine cleavage system h protein | PAM7971_01719 | Not Available | Positive | 1754764 - 1755123 | 13197.6 |
| glycine dehydrogenase (decarboxylating) | PAM7971_01720 | Not Available | Positive | 1755204 - 1758050 | 102515.0 |
| thioredoxin-2 | PAM7971_01721 | Not Available | Positive | 1758141 - 1758587 | 15864.5 |
| translocation and assembly module tamb | PAM7971_01722 | Not Available | Negative | 1758631 - 1761966 | 115572.0 |
| translocation and assembly module tama precursor | PAM7971_01723 | Not Available | Negative | 1761963 - 1763744 | 62615.7 |
| hypothetical protein | PAM7971_01724 | Not Available | Positive | 1763895 - 1764404 | 18002.4 |
| cold shock protein cspa | PAM7971_01726 | Not Available | Negative | 1764536 - 1764742 | 7301.54 |
| hypothetical protein | PAM7971_01727 | Not Available | Positive | 1765017 - 1765496 | 16815.9 |
| hypothetical protein | PAM7971_01728 | Not Available | Positive | 1765715 - 1766101 | 14813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
