Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PAM7971_01687 | Not Available | Negative | 1722571 - 1723230 | 23052.4 |
| hth-type transcriptional regulator lutr | PAM7971_01688 | Not Available | Negative | 1723233 - 1724003 | 28220.7 |
| tripartite tricarboxylate transporter family receptor | PAM7971_01689 | Not Available | Positive | 1724157 - 1725140 | 33655.7 |
| tripartite tricarboxylate transporter tctb family protein | PAM7971_01690 | Not Available | Positive | 1725151 - 1725615 | 15954.6 |
| tripartite tricarboxylate transporter tcta family protein | PAM7971_01691 | Not Available | Positive | 1725612 - 1727165 | 54276.0 |
| gluconate 5-dehydrogenase | PAM7971_01692 | Not Available | Positive | 1727162 - 1727980 | 29568.2 |
| glycerol kinase | PAM7971_01693 | Not Available | Positive | 1727958 - 1728368 | 13796.2 |
| ribulokinase | PAM7971_01694 | Not Available | Positive | 1728391 - 1729068 | 23722.4 |
| hypothetical protein | PAM7971_01695 | Not Available | Positive | 1729322 - 1729657 | 12090.5 |
| hypothetical protein | PAM7971_01696 | Not Available | Positive | 1729676 - 1730353 | 25068.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
