Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAM7971_00133 | Not Available | Positive | 126567 - 127067 | 18978.2 |
| pyrroline-5-carboxylate reductase | PAM7971_00134 | Not Available | Positive | 127183 - 127989 | 27628.7 |
| methionine--trna ligase | PAM7971_00135 | Not Available | Positive | 127986 - 128327 | 12340.0 |
| glycerate dehydrogenase | PAM7971_00136 | Not Available | Positive | 128324 - 129268 | 33517.6 |
| thymidine kinase | PAM7971_00137 | Not Available | Negative | 129342 - 129932 | 21804.0 |
| hypothetical protein | PAM7971_00138 | Not Available | Positive | 130298 - 130756 | 16594.9 |
| atp-dependent rna helicase rhle | PAM7971_00139 | Not Available | Negative | 130823 - 132136 | 47016.4 |
| carbamoyl-phosphate synthase large chain | PAM7971_00140 | Not Available | Negative | 132494 - 135853 | 121460.0 |
| aspartate--trna ligase | PAM7971_00141 | Not Available | Positive | 136217 - 137995 | 66900.9 |
| hypothetical protein | PAM7971_00142 | Not Available | Positive | 138090 - 138605 | 18635.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
