Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system / permease component | PAM7971_01647 | Not Available | Negative | 1682837 - 1683946 | 38324.4 |
| branched-chain amino acid transport system / permease component | PAM7971_01648 | Not Available | Negative | 1683946 - 1685031 | 38216.1 |
| ribose import atp-binding protein rbsa | PAM7971_01649 | Not Available | Negative | 1685028 - 1686563 | 54380.5 |
| xdhc and coxi family protein | PAM7971_01650 | Not Available | Negative | 1686565 - 1687494 | 32906.0 |
| xanthine dehydrogenase molybdenum-binding subunit | PAM7971_01651 | Not Available | Negative | 1687491 - 1689779 | 82182.4 |
| caffeine dehydrogenase subunit gamma | PAM7971_01652 | Not Available | Negative | 1689776 - 1691350 | 56658.0 |
| dna polymerase iii subunit alpha | PAM7971_01653 | Not Available | Positive | 1691364 - 1694885 | 129375.0 |
| hypothetical protein | PAM7971_01654 | Not Available | Positive | 1694885 - 1696000 | 39045.8 |
| hypothetical protein | PAM7971_01655 | Not Available | Negative | 1696023 - 1696259 | 8767.46 |
| histidine--trna ligase | PAM7971_01656 | Not Available | Positive | 1696443 - 1697951 | 55268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
