Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous-iron efflux pump fief | PAM7971_01637 | Not Available | Negative | 1674737 - 1675615 | 30963.8 |
| capsule polysaccharide biosynthesis protein | PAM7971_01638 | Not Available | Negative | 1675640 - 1676629 | 37398.2 |
| bacterial sh3 domain protein | PAM7971_01639 | Not Available | Negative | 1676653 - 1677267 | 22497.0 |
| quercetin 2,3-dioxygenase | PAM7971_01640 | Not Available | Negative | 1677491 - 1678405 | 33971.2 |
| hypothetical protein | PAM7971_01641 | Not Available | Negative | 1678527 - 1679036 | 17947.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PAM7971_01642 | Not Available | Negative | 1679163 - 1679987 | 29478.9 |
| pantothenate synthetase | PAM7971_01643 | Not Available | Negative | 1680021 - 1680869 | 30746.8 |
| hypothetical protein | PAM7971_01644 | Not Available | Positive | 1681007 - 1681114 | 3888.7 |
| carboxymuconolactone decarboxylase family protein | PAM7971_01645 | Not Available | Negative | 1681135 - 1681470 | 11951.5 |
| purine-binding protein precursor | PAM7971_01646 | Not Available | Negative | 1681670 - 1682737 | 38011.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
