Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein family protein | PAM7971_01617 | Not Available | Negative | 1653406 - 1653861 | 16857.7 |
| catechol-2,3-dioxygenase | PAM7971_01618 | Not Available | Negative | 1654117 - 1654620 | 17941.2 |
| tryptophan--trna ligase | PAM7971_01619 | Not Available | Negative | 1654781 - 1655797 | 37291.7 |
| rhomboid family protein | PAM7971_01620 | Not Available | Positive | 1655875 - 1656573 | 24942.2 |
| putative peptidoglycan biosynthesis protein murj | PAM7971_01621 | Not Available | Negative | 1656598 - 1658139 | 54316.1 |
| bifunctional uridylyltransferase/uridylyl-removing enzyme | PAM7971_01622 | Not Available | Negative | 1658136 - 1660955 | 106573.0 |
| hypothetical protein | PAM7971_01623 | Not Available | Negative | 1660915 - 1662096 | 39990.6 |
| ribosomal rna small subunit methyltransferase i | PAM7971_01624 | Not Available | Positive | 1662206 - 1663075 | 30948.5 |
| hypothetical protein | PAM7971_01625 | Not Available | Positive | 1663086 - 1663487 | 14761.8 |
| glutathione synthetase | PAM7971_01626 | Not Available | Positive | 1663587 - 1664531 | 34861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
