Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1612336 - 1612411 | Not Available |
| protein of unknown function (fydln_acid) | PAM7971_01578 | Not Available | Negative | 1612529 - 1612837 | 11405.6 |
| hypothetical protein | PAM7971_01579 | Not Available | Positive | 1612997 - 1613722 | 26949.4 |
| hth-type transcriptional regulator mcbr | PAM7971_01580 | Not Available | Positive | 1613804 - 1614472 | 24502.9 |
| putative acyl-coa thioester hydrolase | PAM7971_01581 | Not Available | Positive | 1614523 - 1615002 | 18120.9 |
| dihydrolipoyl dehydrogenase 3 | PAM7971_01582 | Not Available | Negative | 1615083 - 1616477 | 48571.6 |
| hypothetical protein | PAM7971_01583 | Not Available | Negative | 1616514 - 1617335 | 30712.5 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | PAM7971_01584 | Not Available | Negative | 1617554 - 1619038 | 51159.4 |
| 2-oxoglutarate dehydrogenase e1 component | PAM7971_01585 | Not Available | Negative | 1619043 - 1622006 | 110192.0 |
| succinyl-coa ligase | PAM7971_01586 | Not Available | Negative | 1622143 - 1623027 | 30524.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
