Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit c | PAM7971_01507 | Not Available | Positive | 1534917 - 1535153 | 7697.57 |
| atp synthase subunit b' | PAM7971_01508 | Not Available | Positive | 1535265 - 1535789 | 18114.6 |
| atp synthase subunit b precursor | PAM7971_01509 | Not Available | Positive | 1535794 - 1536354 | 19868.0 |
| pyruvate dehydrogenase complex repressor | PAM7971_01510 | Not Available | Negative | 1536471 - 1537238 | 28826.7 |
| putative lipoprotein yiad precursor | PAM7971_01511 | Not Available | Negative | 1537353 - 1538000 | 21815.8 |
| bifunctional transcriptional activator/dna repair enzyme ada | PAM7971_01512 | Not Available | Negative | 1538104 - 1538949 | 30988.2 |
| endonuclease iii | PAM7971_01513 | Not Available | Positive | 1539107 - 1539754 | 24052.2 |
| 5-dehydro-2-deoxygluconokinase | PAM7971_01514 | Not Available | Positive | 1539747 - 1540733 | 34940.4 |
| dna polymerase i | PAM7971_01515 | Not Available | Negative | 1540814 - 1543639 | 103475.0 |
| zinc-finger domain protein | PAM7971_01516 | Not Available | Negative | 1543810 - 1543995 | 6764.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
