Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase 1 | PAM7971_01476 | Not Available | Positive | 1506852 - 1507700 | 29215.3 |
| amino-acid carrier protein alst | PAM7971_01477 | Not Available | Negative | 1507789 - 1509225 | 50969.6 |
| sulfurtransferase tusa | PAM7971_01478 | Not Available | Positive | 1509456 - 1509725 | 9663.8 |
| molybdenum cofactor guanylyltransferase | PAM7971_01479 | Not Available | Negative | 1509713 - 1510342 | 22831.4 |
| putative transcriptional regulatory protein pdtar | PAM7971_01480 | Not Available | Positive | 1510514 - 1511149 | 23016.8 |
| nitrate transport protein nrta precursor | PAM7971_01481 | Not Available | Positive | 1511146 - 1512321 | 41550.1 |
| bicarbonate transport atp-binding protein cmpc | PAM7971_01482 | Not Available | Positive | 1512606 - 1513973 | 49629.6 |
| bicarbonate transport system permease protein cmpb | PAM7971_01483 | Not Available | Positive | 1514034 - 1515128 | 39502.1 |
| bicarbonate transport atp-binding protein cmpd | PAM7971_01484 | Not Available | Positive | 1515133 - 1516821 | 61725.8 |
| nitrite reductase | PAM7971_01485 | Not Available | Positive | 1516824 - 1518125 | 46079.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
