Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | PAM7971_01466 | Not Available | Positive | 1497983 - 1498729 | 28839.7 |
| fructose-bisphosphate aldolase | PAM7971_01467 | Not Available | Negative | 1498828 - 1499658 | 29411.3 |
| 5-deoxy-glucuronate isomerase | PAM7971_01468 | Not Available | Negative | 1499655 - 1500509 | 31717.6 |
| 5-dehydro-2-deoxygluconokinase | PAM7971_01469 | Not Available | Negative | 1500519 - 1501499 | 34146.7 |
| glucose-6-phosphate 3-dehydrogenase | PAM7971_01470 | Not Available | Positive | 1501691 - 1502788 | 39565.0 |
| hypothetical protein | PAM7971_01471 | Not Available | Positive | 1502810 - 1502911 | 3565.36 |
| glucose--fructose oxidoreductase precursor | PAM7971_01472 | Not Available | Positive | 1502960 - 1504093 | 40863.5 |
| ribose operon repressor | PAM7971_01473 | Not Available | Negative | 1504090 - 1505094 | 36787.9 |
| helix-turn-helix domain protein | PAM7971_01474 | Not Available | Negative | 1505210 - 1506019 | 31166.6 |
| asp/glu/hydantoin racemase | PAM7971_01475 | Not Available | Positive | 1506127 - 1506855 | 26434.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
