Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose-binding periplasmic protein precursor | PAM7971_01456 | Not Available | Positive | 1488028 - 1489047 | 34955.3 |
| ribose transport system permease protein rbsc | PAM7971_01457 | Not Available | Positive | 1489133 - 1490215 | 37749.1 |
| ribose import atp-binding protein rbsa | PAM7971_01458 | Not Available | Positive | 1490215 - 1490997 | 28445.8 |
| putative oxidoreductase yvaa | PAM7971_01459 | Not Available | Positive | 1491347 - 1492387 | 37012.2 |
| putative hth-type transcriptional regulator ydfh | PAM7971_01460 | Not Available | Positive | 1492688 - 1493431 | 28121.0 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PAM7971_01461 | Not Available | Positive | 1493428 - 1494399 | 35169.0 |
| tripartite atp-independent periplasmic transporters, dctq component | PAM7971_01462 | Not Available | Positive | 1494504 - 1495010 | 18395.2 |
| sialic acid trap transporter permease protein siat | PAM7971_01463 | Not Available | Positive | 1495013 - 1496290 | 44063.4 |
| l-idonate 5-dehydrogenase (nad(p)(+)) | PAM7971_01464 | Not Available | Positive | 1496299 - 1497342 | 36365.2 |
| leucine-responsive regulatory protein | PAM7971_01465 | Not Available | Negative | 1497396 - 1497854 | 16830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
