Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein yeje | PAM7971_01446 | Not Available | Positive | 1477638 - 1478744 | 41387.4 |
| glutathione import atp-binding protein gsia | PAM7971_01447 | Not Available | Positive | 1478741 - 1480348 | 58077.8 |
| d-alanyl-d-alanine carboxypeptidase dacf precursor | PAM7971_01448 | Not Available | Negative | 1480387 - 1481961 | 56080.4 |
| dump phosphatase | PAM7971_01449 | Not Available | Negative | 1482180 - 1482890 | 26355.4 |
| atp-dependent clp protease adapter protein clps | PAM7971_01450 | Not Available | Positive | 1483005 - 1483349 | 13121.2 |
| ribosomal rna small subunit methyltransferase c | PAM7971_01451 | Not Available | Positive | 1483372 - 1484352 | 34502.4 |
| gluconate 5-dehydrogenase | PAM7971_01452 | Not Available | Positive | 1484383 - 1485195 | 28990.7 |
| hypothetical protein | PAM7971_01453 | Not Available | Negative | 1485203 - 1485577 | 13493.4 |
| coproporphyrinogen-iii oxidase, aerobic | PAM7971_01454 | Not Available | Positive | 1485698 - 1486591 | 33496.0 |
| n-acetylmannosamine kinase | PAM7971_01455 | Not Available | Negative | 1486647 - 1487846 | 43642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
