Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, mono-heme subunit/fixo | PAM7971_01415 | Not Available | Positive | 1446136 - 1446861 | 27170.2 |
| cbb3-type cytochrome oxidase component fixq | PAM7971_01416 | Not Available | Positive | 1446874 - 1447056 | 7009.27 |
| cbb3-type cytochrome c oxidase subunit ccop | PAM7971_01417 | Not Available | Positive | 1447053 - 1447910 | 31129.7 |
| ubp3 associated protein bre5 | PAM7971_01418 | Not Available | Positive | 1448136 - 1449566 | 53847.8 |
| fixh | PAM7971_01419 | Not Available | Positive | 1449567 - 1450025 | 16624.9 |
| putative copper-transporting atpase pacs | PAM7971_01420 | Not Available | Positive | 1450038 - 1452215 | 75333.2 |
| cytochrome oxidase maturation protein cbb3-type | PAM7971_01421 | Not Available | Positive | 1452212 - 1452373 | 6028.17 |
| esterase tesa precursor | PAM7971_01422 | Not Available | Negative | 1452377 - 1452937 | 19657.2 |
| putative abc transporter atp-binding protein/mt1014 | PAM7971_01423 | Not Available | Positive | 1453092 - 1453784 | 24279.1 |
| ftsx-like permease family protein | PAM7971_01424 | Not Available | Positive | 1453781 - 1456303 | 88367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
