Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor comr | PAM7971_01405 | Not Available | Positive | 1436037 - 1436687 | 23923.7 |
| disulfide-bond oxidoreductase yghu | PAM7971_01406 | Not Available | Positive | 1436702 - 1437565 | 32243.9 |
| disulfide-bond oxidoreductase yfcg | PAM7971_01407 | Not Available | Positive | 1437599 - 1438276 | 24754.4 |
| putative acetyltransferase | PAM7971_01408 | Not Available | Negative | 1438536 - 1439036 | 18409.9 |
| uroporphyrinogen decarboxylase | PAM7971_01409 | Not Available | Negative | 1439033 - 1440067 | 37643.4 |
| porphobilinogen deaminase | PAM7971_01410 | Not Available | Positive | 1440166 - 1441116 | 33921.8 |
| oxygen-independent coproporphyrinogen-iii oxidase | PAM7971_01411 | Not Available | Negative | 1441143 - 1442498 | 50144.8 |
| nitrogen fixation regulation protein fixk | PAM7971_01412 | Not Available | Positive | 1442572 - 1443303 | 26939.8 |
| universal stress protein family protein | PAM7971_01413 | Not Available | Negative | 1443391 - 1444230 | 30524.0 |
| hypothetical protein | PAM7971_01414 | Not Available | Positive | 1444527 - 1446122 | 59548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
