Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general l-amino acid-binding periplasmic protein aapj precursor | PAM7971_01385 | Not Available | Positive | 1415953 - 1416987 | 36131.4 |
| putative glutamine abc transporter permease protein glnm | PAM7971_01386 | Not Available | Positive | 1417126 - 1418346 | 44989.0 |
| inner membrane amino-acid abc transporter permease protein yhdy | PAM7971_01387 | Not Available | Positive | 1418348 - 1419652 | 48470.2 |
| glutamine transport atp-binding protein glnq | PAM7971_01388 | Not Available | Positive | 1419668 - 1420459 | 29983.5 |
| phosphohistidine phosphatase | PAM7971_01389 | Not Available | Negative | 1420527 - 1421036 | 18571.0 |
| acetylglutamate kinase | PAM7971_01390 | Not Available | Negative | 1421036 - 1421965 | 32604.5 |
| putative gtp-binding protein engb | PAM7971_01391 | Not Available | Negative | 1421994 - 1422641 | 23529.4 |
| membrane protein insertase yidc | PAM7971_01392 | Not Available | Negative | 1422659 - 1424470 | 66754.3 |
| cyclic di-gmp phosphodiesterase gmr | PAM7971_01393 | Not Available | Negative | 1424572 - 1426104 | 55167.2 |
| trna 2-thiocytidine biosynthesis protein ttca | PAM7971_01394 | Not Available | Negative | 1426187 - 1427068 | 33293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
