Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit beta | PAM7971_00103 | Not Available | Positive | 102660 - 104084 | 50573.4 |
| atp synthase epsilon chain | PAM7971_00104 | Not Available | Positive | 104221 - 104631 | 14284.9 |
| h-type lectin domain protein | PAM7971_00105 | Not Available | Positive | 104817 - 105164 | 13161.7 |
| ribose-phosphate pyrophosphokinase | PAM7971_00106 | Not Available | Negative | 105296 - 106312 | 37167.9 |
| 2-hydroxychromene-2-carboxylate isomerase | PAM7971_00107 | Not Available | Positive | 106423 - 107025 | 21686.9 |
| low specificity l-threonine aldolase | PAM7971_00108 | Not Available | Negative | 107041 - 108078 | 36590.5 |
| hypothetical protein | PAM7971_00109 | Not Available | Negative | 108078 - 108527 | 17036.3 |
| riboflavin biosynthesis protein ribf | PAM7971_00110 | Not Available | Negative | 108524 - 109450 | 33371.8 |
| (r)-specific enoyl-coa hydratase | PAM7971_00111 | Not Available | Negative | 109480 - 109923 | 16124.6 |
| putative hydrolase yutf | PAM7971_00112 | Not Available | Negative | 110054 - 110929 | 31423.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
