Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
929310 bp
Thymine Count
947708 bp
Guanine Count
1028045 bp
Cytosine Count
1009585 bp
Genome Length
3914648 bp
Protein-coding Genes
3789 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | PAM7971_01265 | Not Available | Positive | 1312160 - 1312690 | 20101.4 |
| peptide deformylase 1 | PAM7971_01266 | Not Available | Positive | 1312759 - 1313262 | 18502.4 |
| methionyl-trna formyltransferase | PAM7971_01267 | Not Available | Positive | 1313259 - 1314164 | 32219.0 |
| hypothetical protein | PAM7971_01268 | Not Available | Positive | 1314174 - 1314413 | 8496.86 |
| hypothetical protein | PAM7971_01269 | Not Available | Positive | 1314423 - 1314662 | 8135.72 |
| hypothetical protein | PAM7971_01270 | Not Available | Negative | 1314799 - 1315422 | 21880.2 |
| ribonuclease hi | PAM7971_01271 | Not Available | Negative | 1315419 - 1315880 | 16838.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PAM7971_01272 | Not Available | Negative | 1315902 - 1316864 | 34564.7 |
| hypothetical protein | PAM7971_01273 | Not Available | Positive | 1316915 - 1317100 | 6425.73 |
| nyn domain protein | PAM7971_01274 | Not Available | Negative | 1317064 - 1317633 | 21869.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
